2^nd Annual Bioimaging Day

April 12, 2006

Newell Simon Hall Room 3305

 

Bioimaging Day is organized by the Center for Bioimage Informatics to bring together researchers from across Carnegie Mellon (including the Departments of Biological Sciences, Biomedical Engineering, Computer Science, Electrical Engineering, Machine Learning, and Robotics) who are applying cutting edge imaging methods to biological problems.

 

9:00-9:10          Jelena Kovacevic    

                           Introduction

 

9:10-9:35          Jelena Kovacevic    

                           New analysis methods for cellular imaging

 

9:35-10:00        Bob Murphy              

                           Generative Models of Protein Subcellular Location Patterns for Systems Biology

 

10:00-10:25      Eric Ahrens              

                  New reagents and computational methods for cellular/molecular MRI

 

10:25-10:45      Coffee Break

 

10:45-11:10      Justin Crowley

                           Quantifying the dynamics of neural processes

 

11:10-11:35      Fred Lanni

                           Patterns of Cell Mechanical Action

                 

11:35-12:00      Geoff Gordon

                           Spectral Clustering

 

12:00-1:00        POSTER SESSION and LUNCH BREAK

 

1:00-1:25          Kris  Dahl

                           Changes in Subcellular Filamentous Network Organization in Disease States

 

1:25-1:50          Marcel Just

                           Imaging of the Brain and Mind

 

1:50-2:10          George Stetten

                  Carotid Artery and Jugular Vein Tracking and Differentiation using Spatiotemporal Analysis

 

2:10-2:35          Brooke McCartney

                           APC Proteins in Cytoskeletal Organization

 

2:35-3:00          Adam Linstedt

                           Fluorescence Imaging to Investigate Control of Organelle Size

 

 

                           Department of Biological Sciences Seminar

3:30-4:30          Dan Kiehart

                           Biophysical and genetic analysis of morphogenesis

                           Mellon Institute Conference Room

POSTERS

 

Andrea Benvin , Yehuda Creeger, Gregory W. Fisher, Alan S. Waggoner, Bruce A. Armitage

Title:                  Supramolecular Fluorescent Labels for Flow Cytometry and Confocal Microscopy Based on Intercalating Dye Arrays Assembled on Nanostructured DNA Templates

 

Hsun-Hsien Chang, Jose M. F. Moura, Yijen L. Wu, and Chien Ho

Title:                  Early Detection of Rejection in Cardiac MRI: A Spectral Graph Approach

 

Amina Chebira, Thomas Merryman, Keridon Williams, Gowri Srinivasa, and Jelena Kovacevic

Title:                  A multiresolution enhancement to generic classifiers of subcellular protein location images

 

Shann-Ching Chen, Geoffrey J. Gordon and Robert F. Murphy

Title:                  A Novel Approximate Inference Approach To Automated Classification Of Protein Subcellular Location Patterns In Multi-Cell Images

 

Gopal Patel, Ender Finol, and Elena Di Martino

Title:                  Biomedical Image Processing - Problem Oriented Methodology

 

Gowri Srinivasa, Lionel Coulot, Heather Kischner, Amina Chebira, Jose Moura and J. Kovacevic

Title:                  Topology preserving STACS segmentation of protein subcellular location images

 

Rebecca L. Webb, Jasper S. Weinberg, Mengning Zhou and Brooke M. McCartney

Title:                  APC2 and Diaphanous function together to organize actin in Drosophila syncytial embryos

 

Ting Zhao, Ajay Surie, and Robert F. Murphy

Title:                  An Object-based Generative Model for Subcellular Location Patterns

 

Sandra Zimmerman, Carrie Mallozzi, and Brooke M. McCartney

Title:                  Genetic mosaic analysis reveals effects of /APC2 APC1/ double mutant clones during /Drosophila/ wing development